This page contains a Flash digital edition of a book.
Localization-Based Super-Resolution Light Microscopy


Biplane FPALM (BPFPALM) is an extension of FPALM to


3D, which works by splitting the detected fluorescence into two separate paths with different overall lengths. Te two images simultaneously formed on separate regions of the camera correspond to two different focal planes and are later fitted with the measured PSF to determine the x, y, and z coordinates of each molecule. BPFPALM of samples was demonstrated with an axial resolution of ~50–75 nm [21, 33], approximately 10-fold improved over conventional fluorescence microscopy. Optical astigmatism is used to determine both axial


and lateral positions of single molecules in 3D STORM [22]. By inserting a cylindrical lens into the detection path of the microscope, two slightly different focal planes result for the x and y dimensions of each molecular image. As a result, fluorophores appear elliptical in x or y depending on their axial position, allowing that axial position to be determined from the molecular image. Interferometric PALM (iPALM) resolves 3D molecular


coordinates of individual PA-FP tagged proteins with ~10 nm axial resolution and ~20 nm lateral resolution using a 4Pi (two-objective) geometry [23]. Te detected fluorescence is divided by a three-way beam splitter and imaged with three cameras. Te relative intensities of the three images of each molecule are then analyzed to determine the axial position of the molecule. iPALM was recently used to deduce the structure of the focal adhesion complex [34]. In the double-helix point spread function (DH-PSF)


method, a phase modulation pattern in the detection path yields a detected PSF with two lobes whose orientation rotates as a function of the axial position of the detected molecule. DH-PSF has a demonstrated resolution of ~10 nm laterally and 20 nm axially over a sample depth of ~2 µm [24]. Polarization FPALM: imaging molecular orientations


at the nanoscale level. Te localization-based imaging techniques described above are crucial for studies of biological structures, but they do not provide information about the orientation or rotational freedom of single molecules. Polarization FPALM (PolPALM) [25] has extended FPALM to image single molecule anisotropies by simultaneously detecting two spatially separated images of the fluorescence, polarized parallel and perpendicular to a specific axis at the sample. To measure the anisotropy for each localized molecule, PolPALM analyzes the relative intensities of molecules in the two images. Te demonstrated resolution of ~17 nm using PolPALM allows quantification of structure on length scales inaccessible to diffraction-limited techniques. Te anisotropy obtained reflects the range of accessible probe orientations and can also be used to quantify binding between molecules.


Conclusion Localization microscopy provides nanoscale spatial


resolution in living fluorescent specimens using far-field optics. Such capabilities suggest that a multitude of fund- amental but previously inaccessible biological questions can now be addressed. Current limitations such as number of simultaneously distinguishable species and the time resolution of imaging are likely to improve with refined experimental methods and improved probes. Furthermore, using existing localization microscopy methods, the number of compatible


16


biological systems is continuously increasing. New biological insights hopefully are imminent.


Acknowledgments Te authors thank M. V. Gudheti and T. J. Gould for


FPALM images included within the article; S.-R. Yin and Vladislav Verkhusha for constructs; and A. Gosse, J. Lake, and J. Gosse for support. Tis work was funded by NIH Career Award K25 AI65459, NIH R15 GM094713, NIH R01 GM094713, NSF MRI CHE-0722759, Maine Technology Institute MTAF 1106 and 2061, UMaine V.P. for Research, and the Maine Economic Improvement Fund (MEIF).


References [1] A Yildiz et al., Science 300 (2003) 2061–65. [2] ST Hess et al., Biophys J 91 (2006) 4258–72. [3] E Betzig et al., Science 313 (2006) 1642–45. [4] MJ Rust et al., Nature Methods 3 (2006) 793–95. [5] H Shroff et al., Nature Methods 5 (2008) 417–23. [6] TJ Gould et al., Nat Protoc 4 (2009) 291–308. [7] T Klein et al., Nature Methods 8 (2011) 7–9. [8] M Heilemann et al., Angew Chem Int Ed Engl 47 (2008) 6172–76.


[9] JS Biteen et al., Nature Methods 5 (2008) 947–49.


[10] SF Lee et al., Biophys J 100 (2011) L31–33. [11] GH Patterson and J Lippincott-Schwartz, Science 297 (2002) 1873–77.


[12] FV Subach et al., Nature Methods 6 (2009) 153–59. [13] VV Verkhusha and A Sorkin, Chem Biol 12 (2005) 279–85.


[14] J Wiedenmann et al., Proc Natl Acad Sci USA 101 (2004) 15905–10.


[15] DM Chudakov et al., Biotechniques 42 (2007) 553, 555, 557 passim.


[16] TJ Gould et al., Nature Protoc 4 (2009) 291–308. [17] SJ Holden et al., Nature Methods 8 (2011) 279–80. [18] M Bates et al., Science 317 (2007) 1749–53. [19] M Bossi et al., Nano Lett 8 (2008) 2463–68. [20] H Shroff et al., Proc Natl Acad Sci USA 104 (2007) 20308–13.


[21] MF Juette et al., Nature Methods 5 (2008) 527–29. [22] B Huang et al., Science 319 (2008) 810–13. [23] G Shtengel et al., Proc Natl Acad Sci USA 106 (2009) 3125–30.


[24] SRP Pavani et al., Proc Natl Acad Sci USA 106 (2009) 2995–99.


[25] TJ Gould et al., Nature Methods 5 (2008) 1027–30. [26] ST Hess et al., Proc Natl Acad Sci USA 104 (2007) 17370–75.


[27] ST Hess et al., Methods Mol Biol 544 (2009) 483–522. [28] TJ Gould and ST Hess, Biophysical Tools for Biologists, Vol 2: In Vivo Techniques 89 (2008) 329–58.


[29] G Patterson et al., Annu Rev Phys Chem 61 (2010) 345–67. [30] XW Zhuang, Nature Photonics 3 (2009) 365–67. [31] CM Waterman-Storer and G Danuser, Curr Biol 12 (2002) R633–40.


[32] S Manley et al., Nature Methods 5 (2008) 155–57. [33] MJ Mlodzianoski et al., Opt Express 17 (2009) 8264–77. [34] P Kanchanawong et al., Nature 468 (2010) 580–84.


www.microscopy-today.com • 2011 July


Page 1  |  Page 2  |  Page 3  |  Page 4  |  Page 5  |  Page 6  |  Page 7  |  Page 8  |  Page 9  |  Page 10  |  Page 11  |  Page 12  |  Page 13  |  Page 14  |  Page 15  |  Page 16  |  Page 17  |  Page 18  |  Page 19  |  Page 20  |  Page 21  |  Page 22  |  Page 23  |  Page 24  |  Page 25  |  Page 26  |  Page 27  |  Page 28  |  Page 29  |  Page 30  |  Page 31  |  Page 32  |  Page 33  |  Page 34  |  Page 35  |  Page 36  |  Page 37  |  Page 38  |  Page 39  |  Page 40  |  Page 41  |  Page 42  |  Page 43  |  Page 44  |  Page 45  |  Page 46  |  Page 47  |  Page 48  |  Page 49  |  Page 50  |  Page 51  |  Page 52  |  Page 53  |  Page 54  |  Page 55  |  Page 56  |  Page 57  |  Page 58  |  Page 59  |  Page 60  |  Page 61  |  Page 62  |  Page 63  |  Page 64  |  Page 65  |  Page 66  |  Page 67  |  Page 68  |  Page 69  |  Page 70  |  Page 71  |  Page 72  |  Page 73  |  Page 74  |  Page 75  |  Page 76  |  Page 77  |  Page 78  |  Page 79  |  Page 80  |  Page 81  |  Page 82  |  Page 83  |  Page 84