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LEADER Contents Tech focus: storage


Laboratory informatics An augmented future


Robert Roe looks at the use of augmented analytics to bring data-driven decision making in reach of laboratories


An operating system for data


Graeme Dennis, commercial director at preclinical pharma, IDBS, feels it may be time to move away from traditional definitions of scientific informatics software


Digital transformation in biology


Robert Roe looks at the work of synthetic biology company Synthace


Supporting science Turn the laboratory into a knowledge centre 16


Sophia Ktori concludes her two-part series on the development of ELN and LIMS software


20


Isabel Munoz and Roberto Castelnovo preview the Paperless Lab Academy event


Modelling and simulation The Imperfect Storm


Resources News


Suppliers’ directory


Editorial and administrative team Editor: Robert Roe robert.roe@europascience.com Managing editor: Tim Gillett editor.scw@europascience.com Specialist reporters: Sophia Ktori, Gemma Church, Design: David Houghton, Zöe Andrews Partnership & Events Executive: Charlie Mitchell charlie.mitchell@europascience.com


Advertising team Advertising manager: Mike Nelson mike.nelson@europascience.com +44 (0) 1223 221039 Production manager: David Houghton david.houghton@europascience.com +44 (0) 1223 221034


Corporate team Managing director: Warren Clark


Scientific Computing World is published by Europa Science Ltd, 4 Signet Court, Cambridge, CB5 8LA l ISSN 1744-8026 Tel: +44 (0) 1223 211170 l Fax: +44 (0) 1223 213385 Web: www.researchinformation.info


14 13 April/May 2019 l Issue 165


Robert Roe Editor


High performance computing Exascale development


4


With the first exascale systems on the horizon, Robert Roe, looks at the technologies that will be used in the first generation of exascale supercomputers


8 Robert Roe highlights developments in storage technology for HPC


Mighty answer to huge challenges


10


This issue features some grand challenges, such as overcoming bottlenecks in biological research and climate and weather modelling. But we also focus on the announcement of the first US exascale system – a computer powerful enough to solve many of today’s most complex scientific questions. One thing is clear. Across all scientific


computing industries, the challenges we face are becoming more complex, and so too must the tools we use to solve them. The announcement of the exascale


system, Aurora, can be found on page 4. The article also looks at European efforts to develop home-grown computing technology, as bids are prepared for two pre-exascale systems. On page 8 we have our second


24


Gemma Church uncovers the vast range of modelling and simulation tools required for accurate weather prediction


27 30


Subscriptions: Free registration is available to qualifying individuals. Register online at www.scientific-computing.com Subscriptions £180 a year for six issues to readers outside registration requirements. Single issue £20. Orders to ESL, SCW Circulation, 4 Signet Court, Swann Road, Cambridge, CB5 8LA, UK. Tel: +44 (0)1223 221 030. Fax: +44 (0)1223 213 385. ©2019 Europa Science Ltd.


While every care has been taken in the compilation of this magazine, errors or omissions are not the responsibility of the publishers or of the editorial staff. Opinions expressed are not necessarily those of the publishers or editorial staff. All rights reserved. Unless specifically stated, goods or services mentioned are not formally endorsed by Europa Science Ltd, which does not guarantee or endorse or accept any liability for any goods and/or services featured in this publication.


US copies: Scientific Computing World (ISSN 1356-7853/USPS No 018-753) is published bi-monthly for £180 per year by Europa Science Ltd, and distributed in the USA by DSW, 75 Aberdeen Rd, Emigsville PA 17318-0437. Periodicals postage paid at Emigsville PA. Postmaster: Send address corrections to Scientific Computing World PO Box 437, Emigsville, PA 17318-0437.


Cover: Beeboys/Shutterstock.com


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www.scientific-computing.com | @scwmagazine


technology focus of the year. In this issue we look at the role of storage technology in HPC and how the development of AI, and applications such as weather and climate research, are driving new levels of performance. On page 10 we highlight a recent white paper from DataStories, which looks at the potential for augmented analytics to increase the efficiency of lab users and enable data-driven decision making in the lab. Graeme Dennis, of preclinical pharma,


IDBS, notes it may be time to move away from traditional definitions of scientific informatics software on page 13, while we explore the role software can play in the age of digital lab technologies, automation and synthetic biology on page 14. The second half of Sophia Ktori’s feature on LIMS and ELN technology is on page 16, while a preview of the Paperless Lab Academy event held soon in northern Italy starts on page 20. The modelling and simulation coverage starts on page 24 with a feature on the use of simulation software used in weather and climate modelling, by Gemma Church.


@scwmagazine


SCIENTIFIC COMPUTING WORLD


April/May 2019 Scientific Computing World 3


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