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LEADER Contents HPC trends


Hsueh-Li Wang discusses HPC trends that include data analysis, virtualisation and how hardware developers are looking to solve the challenges in HPC performance


Exascale ambitions Quantum research at LBL


Experimental physicists at Lawrence Berkeley have demonstrated error characterisation on their qutrit quantum processor


Laboratory informatics Cheminformatics


Advances in laboratory software are helping to enhance scientists ability to design new drugs, finds Sophia Ktori


Sponsored content Empowering chemistry research Advancing laboratory thinking


Modelling and simulation Multibody dynamics


Resources News


The latest news stories in scientific computing Suppliers directory


Editorial and administrative team Editor: Robert Roe robert.roe@europascience.com Managing editor: Tim Gillett editor.scw@europascience.com Specialist reporters: Sophia Ktori, Gemma Church Design: David Houghton, Zöe Andrews Partnership & events executive: Charlie Mitchell charlie.mitchell@europascience.com


Advertising team Advertising manager: Mike Nelson mike.nelson@europascience.com +44 (0) 1223 221039 Production manager: David Houghton david.houghton@europascience.com +44 (0) 1223 221034


Corporate team Managing director: Warren Clark


Scientific Computing World is published by Europa Science Ltd, 4 Signet Court, Cambridge, CB5 8LA l ISSN 1744-8026 Tel: +44 (0) 1223 211170 l Fax: +44 (0) 1223 213385 Web: www.researchinformation.info


19


Merck’s retrosynthesis design software gives chemists the freedom to generate a synthetic route for just about any desired chemical compound


20


Thermo Fisher’s James Pena gives his thoughts on how scientists can advance their research with cloud technology in the lab


10


Simon McIntosh-Smith discusses the role of the ExCALIBUR project in ensuring that UK research is at the forefront of HPC


12 Autumn 2021 l Issue 177


Robert Roe Editor


High performance computing Tech focus: Cluster management


This article highlights software tools that can help scientists to more easily develop or port applications for HPC


8 4


This article examines a selection of cluster management tools for HPC Tech focus: Software tools


6


A focus on the future


14


As the final issue of Scientific Computing World, this year there is a focus on the future and the innovative ways that computing is helping to shape scientific research. In this issue there are examples of how computing is evolving with new and emerging technologies, such as AI beginning to find real-world applications. Similarly, new paradigms in computing, such as quantum, are gaining momentum and overcoming technological challenges. This is a hugely exciting time for scientists as the resources available to them continue to increase at an astonishing rate. On page 4, coverage of the high-


23


Gemma Church examines the democratisation of MultiBody Dynamics (MBD) simulation and the impact of advancing electrification


26 30


Subscriptions: Free registration is available to qualifying individuals. Register online at www.scientific-computing.com Subscriptions £180 a year for six issues to readers outside registration requirements. Single issue £20. Orders to ESL, SCW Circulation, 4 Signet Court, Swann Road, Cambridge, CB5 8LA, UK. Tel: +44 (0)1223 221 030. Fax: +44 (0)1223 213 385. ©2021 Europa Science Ltd.


While every care has been taken in the compilation of this magazine, errors or omissions are not the responsibility of the publishers or of the editorial staff. Opinions expressed are not necessarily those of the publishers or editorial staff. All rights reserved. Unless specifically stated, goods or services mentioned are not formally endorsed by Europa Science Ltd, which does not guarantee or endorse or accept any liability for any goods and/or services featured in this publication.


US copies: Scientific Computing World (ISSN 1356-7853/USPS No 018-753) is published bi-monthly for £180 per year by Europa Science Ltd, and distributed in the USA by DSW, 75 Aberdeen Rd, Emigsville PA 17318-0437. Periodicals postage paid at Emigsville PA. Postmaster: Send address corrections to Scientific Computing World PO Box 437, Emigsville, PA 17318-0437.


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www.scientific-computing.com | @scwmagazine


performance computing industry begins with two tech focus articles, looking at tools for cluster management, and application development and porting on page 4 and 6 respectively. Next, on page 8, there is a piece on HPC trends and how hardware vendors are overcoming challenges to future hardware performance increases. On page 10 there is an interview with Simon McIntosh-Smith who discusses the role of the ExCALIBUR project in ensuring that UK research is at the forefront of HPC. This is a multi-year project that aims to ensure UK scientific codes are ready to meet the demands of exascale systems. Finally, on page 12 is an article which looks at the research of experimental physicists at Lawrence Berkeley, who are creating their own quantum processors. The laboratory informatics section


starts on page 14, with Sophia Ktori’s feature on cheminformatics and how the software is helping to drive the development of new drugs. On page 20 there is an article which takes a look at a new innovation laboratory driving AI and computational methods in biotech. The modelling and simulation feature on page 23 of this issue focuses on the use of multibody dynamics simulation. Gemma Church finds that democratisation of complex software is driving new product development and increasing the impact of electrification.


Autumn 2021 Scientific Computing World 3


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